Analysis
Non-technical description of how we analyse each spotted microarray experiment
- See FCAN for an overview of our automated data analysis pipeline
- See scanning for a description of microarray image acquisition
- See spot signal for a description of how we find and then quantify the spot signals
- See assign ID for a description of how we assign the spot identities
- See normalise for a description of how we correct known sources of systematic bias
- See average for a description of how we average across the replicate hybridisations
- See data release for a list of the files that we will send to you
- See downloads for spot description and 'Affymetrix to FlyChip' mapping files, etc...
Non-technical description of how we analyse each Affymetrix microarray experiment
We use the standard tools which are available from the Affymetrix: http://www.affymetrix.com/.
Further help required...?
For a general introduction to the analysis of microarray experiments and links to useful tools, please refer to data analysis in links. Contact us directly, if you have any additional questions.
